Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015086.1 Corchorus olitorius cultivar O-4 contig15119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53997

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7515--7547
3
11.0
3
93
0
57
63
3
33
0
1.10
15727--15807
22
3.5
24
69
25
68
38
2
1
58
1.20
29722--29774
28
1.9
27
96
3
97
45
1
22
30
1.63
32312--32342
1
31.0
1
100
0
62
0
0
0
100
0.00
36702--36742
18
2.3
19
80
16
52
36
7
17
39
1.77
39166--39229
28
2.6
23
69
21
65
31
6
25
37
1.81
41831--42141
158
2.0
158
98
0
604
38
15
16
29
1.90

Tables:   1

The End!