Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015090.1 Corchorus olitorius cultivar O-4 contig15123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21139

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--628
106
2.5
106
83
4
316
41
8
9
40
1.68
5616--5645
9
3.2
9
90
9
51
13
10
0
76
1.01
7874--7937
31
2.1
31
100
0
128
31
9
15
43
1.78
9061--9163
50
2.1
50
100
0
206
35
17
13
33
1.89
10457--10486
12
2.5
12
88
0
51
60
40
0
0
0.97
13380--14263
438
2.0
434
85
5
1169
41
12
14
30
1.84
20885--20925
19
2.2
19
86
8
57
9
7
7
75
1.18

Tables:   1

The End!