Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015091.1 Corchorus olitorius cultivar O-4 contig15124, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45471

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8253--8292
15
2.6
16
88
4
55
32
12
10
45
1.75
10101--10240
67
2.1
68
84
1
183
31
15
16
36
1.90
12199--12233
1
35.0
1
94
0
61
0
0
2
97
0.19
16321--16346
13
2.0
13
100
0
52
53
7
23
15
1.67
17202--17257
16
3.6
16
70
18
55
42
3
5
48
1.43
17198--17256
30
2.0
30
89
0
91
40
3
5
50
1.41
18950--19021
36
2.0
36
91
0
117
22
26
12
38
1.89
27726--28031
163
1.9
153
90
7
490
35
21
12
30
1.90
27948--27972
12
2.1
12
100
0
50
52
40
0
8
1.31
28095--28131
15
2.3
17
86
9
51
64
18
0
16
1.29
35793--35890
50
1.9
51
95
2
180
27
14
22
35
1.93

Tables:   1

The End!