Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015096.1 Corchorus olitorius cultivar O-4 contig15129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30051

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13321--13360
19
2.2
18
86
4
53
27
20
5
47
1.70
18930--19022
27
3.4
28
79
10
102
35
31
16
17
1.92
18962--19032
27
2.7
25
79
12
79
33
30
18
16
1.93
27281--27305
8
3.1
8
100
0
50
64
24
0
12
1.27
27363--27422
30
2.0
30
87
6
86
46
10
8
35
1.67
27446--27478
16
1.9
18
88
11
52
72
3
12
12
1.23
27441--27500
28
2.1
29
87
6
88
70
5
11
13
1.33
28563--28676
32
3.5
32
84
4
140
26
15
22
35
1.94
29400--29462
27
2.4
26
86
2
81
12
19
26
41
1.87

Tables:   1

The End!