Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015105.1 Corchorus olitorius cultivar O-4 contig15138, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23726

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4875--4921
26
1.9
23
87
12
67
40
4
27
27
1.75
5380--5428
11
4.5
11
94
0
80
51
8
32
8
1.61
6764--6818
27
1.9
30
85
10
80
34
3
0
61
1.13
6871--6905
2
17.5
2
100
0
70
48
0
0
51
1.00
9109--9169
25
2.5
25
89
2
88
63
13
6
16
1.48
9354--9435
31
2.6
32
75
11
80
30
3
7
58
1.43
9911--9987
16
4.8
16
78
10
86
40
36
15
7
1.76
9911--9996
32
2.7
32
87
5
120
41
36
15
6
1.74
18806--18857
25
2.1
25
100
0
104
59
9
19
11
1.59
18881--18917
19
1.9
19
88
0
56
45
5
35
13
1.66
22982--23037
3
18.7
3
100
0
112
33
0
0
66
0.92

Tables:   1

The End!