Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015116.1 Corchorus olitorius cultivar O-4 contig15149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14282

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--114
34
3.1
34
78
18
129
32
14
14
38
1.86
32--303
42
5.8
49
77
16
274
32
14
13
38
1.86
32--303
92
2.9
93
87
7
379
32
14
13
38
1.86
8020--8064
23
2.0
23
86
8
65
66
6
6
20
1.38
12122--12231
49
2.2
49
98
0
211
10
21
32
34
1.89
13640--13697
24
2.4
24
88
0
89
22
12
41
24
1.87

Tables:   1

The End!