Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015118.1 Corchorus olitorius cultivar O-4 contig15151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3173

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
557--827
14
19.6
14
70
22
157
29
21
1
47
1.58
557--837
22
12.5
22
76
15
213
29
21
1
47
1.58
559--826
36
7.8
35
77
17
276
29
21
1
47
1.58
559--775
73
3.1
72
84
11
299
30
21
0
47
1.54
805--997
56
3.4
56
88
2
278
26
23
8
41
1.83
1043--1090
24
2.0
24
87
0
69
20
25
6
47
1.73
1043--1081
16
2.4
16
86
0
51
20
28
5
46
1.72
1148--1188
20
2.0
20
100
0
82
31
19
4
43
1.72
1112--1224
59
1.9
59
98
0
217
26
18
16
38
1.92
1168--1517
39
9.0
39
95
0
522
27
17
20
33
1.96
1467--1573
56
1.9
56
92
0
178
29
17
21
30
1.96
1657--1727
34
2.1
35
84
7
92
21
23
15
39
1.91
2073--2144
36
2.0
37
86
2
101
19
30
13
36
1.91
2166--2315
72
2.1
72
91
0
237
17
16
24
42
1.89

Tables:   1

The End!