Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015127.1 Corchorus olitorius cultivar O-4 contig15160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19465

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--476
19
2.1
20
86
9
57
12
12
17
57
1.65
1374--1451
34
2.3
35
81
4
95
24
12
17
44
1.84
1393--1470
34
2.3
34
84
0
102
26
19
19
34
1.95
3221--3297
27
2.8
27
82
2
91
19
20
23
36
1.95
8178--8606
187
2.3
187
91
2
689
38
20
7
33
1.81
8408--9081
211
3.2
211
94
0
1177
37
20
7
34
1.81
9339--9408
29
2.3
31
85
4
90
32
11
27
28
1.91
15880--15915
18
2.0
18
100
0
72
16
5
22
55
1.62

Tables:   1

The End!