Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015128.1 Corchorus olitorius cultivar O-4 contig15161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7626

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
331--404
28
2.6
28
87
6
96
45
24
14
14
1.83
902--1449
30
18.2
30
88
1
717
47
19
13
19
1.83
1789--1857
31
2.2
31
84
0
84
46
21
14
17
1.84
2048--2158
31
3.5
31
76
13
134
38
20
18
22
1.93
1872--2203
66
4.9
66
84
5
342
39
18
20
21
1.92
1714--2311
35
17.3
35
75
9
390
41
18
19
20
1.90
3494--3548
24
2.2
25
81
12
60
10
21
0
67
1.21
4243--4272
2
15.0
2
100
0
60
50
0
0
50
1.00
7186--7228
22
2.0
22
86
9
61
53
11
16
18
1.72

Tables:   1

The End!