Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015136.1 Corchorus olitorius cultivar O-4 contig15169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21383

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7204--7353
50
3.0
50
86
0
201
45
20
11
23
1.83
11475--11502
1
28.0
1
100
0
56
0
0
0
100
0.00
12110--12151
21
2.0
21
86
9
59
16
0
35
47
1.47
12148--12196
25
2.0
25
100
0
98
34
20
32
12
1.90
16647--16719
21
3.6
19
88
3
65
34
10
23
31
1.89
16666--16718
21
2.5
21
100
0
106
33
11
22
32
1.90
19956--20069
59
1.9
59
89
3
176
38
11
15
34
1.84
19956--20091
58
2.3
60
82
3
177
37
12
16
33
1.87
20719--20803
43
2.0
43
88
0
125
49
20
8
22
1.75
21040--21086
11
4.5
10
86
7
67
4
55
38
2
1.31
21040--21086
5
9.0
5
86
9
67
4
55
38
2
1.31
21040--21086
16
3.0
16
90
3
78
4
55
38
2
1.31

Tables:   1

The End!