Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015144.1 Corchorus olitorius cultivar O-4 contig15177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4451

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
890--939
13
4.3
12
80
9
52
2
22
0
76
0.89
1039--1127
46
1.9
46
86
0
124
15
38
32
13
1.87
1775--1806
1
32.0
1
100
0
64
0
0
0
100
0.00
2623--2652
2
15.0
2
100
0
60
50
0
0
50
1.00
4190--4240
6
8.5
6
85
14
70
37
15
0
47
1.46

Tables:   1

The End!