Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015148.1 Corchorus olitorius cultivar O-4 contig15181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33118

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1482--1535
29
1.9
27
82
14
65
37
3
3
55
1.35
1821--1898
36
2.1
37
92
4
140
28
15
21
34
1.94
13169--13194
13
2.0
13
100
0
52
15
0
30
53
1.42
14934--15039
51
2.1
51
82
7
126
24
25
10
39
1.87
14949--15055
51
2.1
51
84
5
137
21
24
12
42
1.87
17664--17736
35
2.1
35
92
0
119
30
12
12
45
1.78
22847--22944
44
2.2
44
100
0
196
38
26
8
26
1.84
30606--30647
15
2.7
15
92
3
66
64
14
9
11
1.50
32021--32078
29
2.0
29
83
6
73
29
22
10
37
1.87

Tables:   1

The End!