Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015150.1 Corchorus olitorius cultivar O-4 contig15183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18267

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6621--6665
2
23.5
2
86
8
67
46
0
0
53
1.00
9958--10013
28
2.0
28
82
6
69
48
1
7
42
1.41
11664--11690
2
13.5
2
100
0
54
48
0
0
51
1.00
12324--12360
18
2.1
18
89
0
56
40
8
0
51
1.32
14819--14847
15
1.9
15
100
0
58
27
10
27
34
1.89
14822--14855
15
2.3
15
89
0
50
26
11
26
35
1.91
15403--15458
29
1.9
29
100
0
112
30
10
14
44
1.79
15613--15637
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!