Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015151.1 Corchorus olitorius cultivar O-4 contig15184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18492

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--69
12
2.1
12
100
0
50
24
20
16
40
1.91
162--204
21
2.0
20
86
8
59
34
4
44
16
1.68
552--689
53
2.6
52
93
5
233
32
19
13
34
1.90
779--822
16
2.7
16
85
3
52
63
13
2
20
1.40
1181--1310
66
2.0
64
95
3
233
35
10
10
43
1.75
3155--3194
19
2.2
18
86
4
53
30
12
27
30
1.93
3492--3784
30
9.6
30
86
3
372
29
16
18
36
1.92
4234--4496
30
8.6
30
85
4
314
30
14
18
36
1.91
6859--7121
30
8.6
30
86
3
330
30
15
18
36
1.92
16818--16849
7
4.6
7
96
0
55
75
15
0
9
1.05

Tables:   1

The End!