Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015181.1 Corchorus olitorius cultivar O-4 contig15214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41220

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--485
27
2.3
27
97
0
115
37
16
12
33
1.87
2061--2114
22
2.5
22
78
0
63
7
24
44
24
1.79
2076--2121
22
2.1
22
83
0
56
8
28
43
19
1.80
11266--11314
24
2.0
24
100
0
98
40
24
10
24
1.86
11381--11424
21
2.1
21
100
0
88
22
9
22
45
1.80
24565--24628
21
3.1
21
75
8
69
32
20
9
37
1.85
32528--32576
23
2.1
23
100
0
98
57
4
12
26
1.53

Tables:   1

The End!