Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015182.1 Corchorus olitorius cultivar O-4 contig15215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10189

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
459--490
12
2.7
12
100
0
64
59
31
0
9
1.29
636--730
48
2.0
48
100
0
190
33
12
9
44
1.75
4109--4243
72
1.9
72
95
0
243
34
7
13
45
1.71
4908--4934
2
13.5
2
100
0
54
48
0
0
51
1.00
6340--6369
1
30.0
1
100
0
60
0
0
0
100
0.00
6597--6622
2
13.0
2
100
0
52
50
0
0
50
1.00
6763--7264
274
1.8
272
81
3
632
36
12
13
37
1.83
7033--8933
332
5.7
329
82
4
1983
32
13
16
38
1.87

Tables:   1

The End!