Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015187.1 Corchorus olitorius cultivar O-4 contig15220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20141

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1989--2050
21
2.5
25
68
26
60
30
12
17
38
1.88
2002--2041
21
1.9
21
100
0
80
30
15
15
40
1.87
9617--9696
38
2.0
40
90
4
128
50
8
3
37
1.52
9629--9691
21
3.2
21
67
17
62
49
11
3
36
1.54
9687--9733
25
1.9
24
95
4
85
29
6
8
55
1.55
13534--13595
29
2.1
29
90
0
97
43
11
24
20
1.85

Tables:   1

The End!