Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015192.1 Corchorus olitorius cultivar O-4 contig15225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8420

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56--100
2
22.5
2
100
0
90
48
0
0
51
1.00
590--624
18
1.9
18
94
0
61
37
0
40
22
1.55
1683--1713
12
2.6
12
100
0
62
16
29
6
48
1.70
1875--2137
107
2.5
106
93
3
433
42
8
9
39
1.68
3361--3400
21
2.1
19
86
13
55
20
27
15
37
1.92
5873--6097
111
2.0
112
95
0
407
31
15
23
30
1.95
6763--6854
43
2.1
42
82
5
112
44
14
8
32
1.75
6778--6861
22
3.9
22
82
3
98
44
15
8
32
1.76
6778--6861
43
1.9
44
87
2
125
44
15
8
32
1.76
6878--7630
22
34.6
21
69
15
177
36
16
11
34
1.85
6779--7631
66
13.0
65
72
10
520
37
17
10
34
1.85
6756--7631
44
20.0
42
69
14
345
37
17
10
34
1.85
7113--7303
101
1.9
101
82
2
240
38
18
10
32
1.85
7220--7682
22
21.1
22
74
7
316
35
17
11
35
1.86

Tables:   1

The End!