Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015196.1 Corchorus olitorius cultivar O-4 contig15229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10174

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
551--667
60
2.0
59
90
5
184
45
1
11
41
1.50
657--759
26
4.0
25
73
19
88
53
8
2
34
1.47
657--753
49
1.9
51
91
4
162
53
8
3
35
1.46
745--782
20
1.9
20
94
0
67
60
2
5
31
1.33
5119--5184
31
2.1
32
91
5
107
10
12
19
57
1.63
5486--5515
14
2.1
14
93
0
51
36
33
0
30
1.58
9024--9079
28
2.0
28
86
3
78
62
3
1
32
1.23

Tables:   1

The End!