Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015204.1 Corchorus olitorius cultivar O-4 contig15237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29457

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421--459
13
2.9
14
85
7
55
25
38
5
30
1.78
720--754
17
2.1
17
88
0
52
37
5
20
37
1.76
1482--1528
19
2.6
18
86
6
67
57
0
2
40
1.11
14396--14442
18
2.6
18
76
6
51
23
25
21
29
1.99
17123--17157
16
2.2
16
100
0
70
65
0
22
11
1.24
22539--22582
17
2.9
14
83
16
52
47
6
2
43
1.42
22540--22686
76
1.9
77
90
1
233
40
12
4
42
1.62
22874--22913
18
2.2
19
86
13
57
45
2
5
47
1.38
25611--25727
58
2.0
58
86
6
164
35
13
19
31
1.91
26983--27052
36
1.9
36
91
0
113
21
10
8
60
1.55
27877--27957
39
2.0
40
92
2
137
37
3
8
50
1.51
27998--28043
18
2.6
18
79
10
58
47
0
2
50
1.13
29023--29052
12
2.4
13
94
5
53
36
16
20
26
1.93

Tables:   1

The End!