Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015210.1 Corchorus olitorius cultivar O-4 contig15243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7971

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6327--6465
54
2.6
54
89
3
210
28
16
21
33
1.95
6380--6558
92
1.9
93
88
3
272
26
16
22
33
1.96
6227--6607
146
2.6
146
96
1
683
26
17
22
34
1.95
6472--6778
106
2.9
107
78
9
297
26
15
22
35
1.94
6472--6939
54
8.7
54
78
9
295
26
16
22
33
1.95
6472--6938
160
2.9
159
79
7
416
26
16
22
34
1.95
6644--6939
106
2.7
108
80
9
309
27
17
23
32
1.96
6650--6938
160
1.8
160
87
4
431
26
17
23
32
1.96
6904--7496
35
17.0
35
89
5
830
27
13
18
40
1.88
6932--6989
19
3.2
19
67
30
54
24
15
20
39
1.91
6913--7496
174
3.4
174
91
3
933
27
13
18
40
1.88
7468--7790
53
5.9
54
74
10
257
28
18
21
32
1.96
7468--7747
107
2.6
107
79
10
275
29
18
20
32
1.96

Tables:   1

The End!