Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015223.1 Corchorus olitorius cultivar O-4 contig15256, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18943

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119--225
56
1.9
56
92
0
178
27
11
18
42
1.84
4557--4595
14
2.9
13
85
7
51
0
0
17
82
0.68
9442--9495
21
2.6
21
77
13
67
18
5
5
70
1.27
15241--15270
15
2.0
15
93
0
51
56
0
40
3
1.16
16460--16540
39
2.0
40
92
2
137
51
7
2
38
1.43
16472--16535
17
3.2
21
64
20
55
51
9
1
37
1.44
16625--17030
197
2.0
200
93
4
703
36
11
8
43
1.71
17544--17613
36
1.9
36
85
0
95
60
8
10
21
1.55

Tables:   1

The End!