Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015232.1 Corchorus olitorius cultivar O-4 contig15265, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23661

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5500--5534
12
2.9
12
82
0
52
34
31
20
14
1.92
10151--10193
12
3.6
12
80
0
50
39
25
20
13
1.90
12623--12666
21
2.2
20
83
4
52
56
4
6
31
1.46
13838--14503
344
1.9
346
84
3
903
40
12
8
39
1.73
16901--17078
90
2.0
89
95
1
320
48
7
7
35
1.60
18226--18300
39
1.9
38
91
2
123
52
8
2
37
1.45
22722--22768
25
1.9
24
91
4
76
55
6
8
29
1.55
22759--22839
39
2.0
40
90
6
130
35
3
8
51
1.50

Tables:   1

The End!