Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015235.1 Corchorus olitorius cultivar O-4 contig15268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9802

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2040--2125
44
2.0
43
81
6
102
24
19
11
44
1.84
2737--2782
19
2.5
20
75
13
53
45
10
13
30
1.77
3610--3648
12
3.2
12
81
0
51
58
10
2
28
1.44
3983--4035
13
3.9
13
77
18
54
75
0
16
7
1.02
5014--5308
105
2.8
105
91
0
455
27
28
16
27
1.97
5324--5630
35
8.8
35
91
1
481
28
19
22
29
1.98
5933--6063
27
4.8
26
79
7
129
16
17
26
38
1.91
6894--6932
16
2.4
16
82
0
51
71
0
25
2
0.98

Tables:   1

The End!