Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015252.1 Corchorus olitorius cultivar O-4 contig15285, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61497

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1121--1187
16
4.7
15
70
22
54
49
17
0
32
1.48
1380--1416
19
2.0
19
89
5
58
32
2
0
64
1.07
1696--1721
13
2.0
13
100
0
52
38
0
15
46
1.46
1536--1857
169
1.9
169
91
0
527
38
9
22
30
1.85
4557--4678
42
3.2
41
69
26
122
37
16
18
27
1.92
4519--4703
72
2.6
72
90
0
280
37
18
16
26
1.92
4654--4714
30
2.0
30
84
6
79
40
18
13
27
1.87
31980--32025
18
2.3
20
75
10
51
76
4
13
6
1.14
35926--36015
33
2.7
33
87
0
117
35
20
6
37
1.79
36465--36563
30
3.3
30
84
5
146
13
18
35
33
1.89
52284--52611
84
3.9
84
91
2
525
41
26
10
21
1.85
52283--52612
43
7.8
43
81
8
383
41
26
10
21
1.85
59337--59806
72
6.5
72
87
0
665
20
26
20
31
1.98
61008--61335
84
3.9
84
90
2
516
41
26
10
21
1.84
61007--61336
43
7.8
43
82
9
385
41
26
10
21
1.84

Tables:   1

The End!