Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015260.1 Corchorus olitorius cultivar O-4 contig15293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76808

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
819--853
2
17.5
2
100
0
70
51
0
0
48
1.00
6703--6774
29
2.4
30
77
9
76
15
26
12
45
1.81
12743--12782
20
2.0
20
95
0
71
37
25
20
17
1.94
30060--30123
23
2.8
23
90
0
101
29
14
12
43
1.81
47671--47730
30
2.0
30
100
0
120
50
16
20
13
1.78
53791--53847
28
2.0
28
100
0
114
36
24
14
24
1.92
56613--56655
19
2.3
19
96
4
79
65
9
11
13
1.48
63802--64343
216
2.5
216
85
3
703
34
7
20
37
1.80
64659--64704
20
2.2
20
84
3
56
73
4
6
15
1.19
70020--70049
13
2.3
13
94
0
51
30
6
3
60
1.39

Tables:   1

The End!