Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01015276.1 Corchorus olitorius cultivar O-4 contig15309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 7285
ACGTcount: A:0.31, C:0.16, G:0.21, T:0.32
Found at i:460 original size:22 final size:22
Alignment explanation
Indices: 420--465 Score: 56
Period size: 22 Copynumber: 2.1 Consensus size: 22
410 ATAAAGGGTA
*
420 ATAAAAAAAAATTAATTTTACT
1 ATAAAAAAAAAGTAATTTTACT
* * *
442 ATAAAAAGAAAGTAGTTTTTCT
1 ATAAAAAAAAAGTAATTTTACT
464 AT
1 AT
466 GATAGAGGAG
Statistics
Matches: 20, Mismatches: 4, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
22 20 1.00
ACGTcount: A:0.52, C:0.04, G:0.07, T:0.37
Consensus pattern (22 bp):
ATAAAAAAAAAGTAATTTTACT
Found at i:1331 original size:19 final size:18
Alignment explanation
Indices: 1307--1342 Score: 54
Period size: 19 Copynumber: 1.9 Consensus size: 18
1297 TGAAGACTTA
*
1307 TTGAAGACTATTTGAAGAT
1 TTGAAGACCA-TTGAAGAT
1326 TTGAAGACCATTGAAGA
1 TTGAAGACCATTGAAGA
1343 ATAATTTCAA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
18 7 0.44
19 9 0.56
ACGTcount: A:0.39, C:0.08, G:0.22, T:0.31
Consensus pattern (18 bp):
TTGAAGACCATTGAAGAT
Found at i:6178 original size:35 final size:35
Alignment explanation
Indices: 6132--6701 Score: 184
Period size: 35 Copynumber: 15.0 Consensus size: 35
6122 CAAGTTTTAT
* *
6132 AAAAGTCGGCATCGGTTGGCCTTCTTTAAATCTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTTAAATTTTC
*
6167 AAAAGTTGGCATCGGTTGGCCTTCTAATT-AGTTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCT--TTAAATTTTC
*
6203 -AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTTA
1 AAAAGTTGGCATCGGTTGGCCTTCTTT--AA---A---TTTTC
* **
6245 AAAAGTGGGCATCGGTTGGCCTTCTAAAAAGTTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTTAAA-TTTTC
* *
6281 -AAAGTTGGTATCGGTTGGCCTTCTTAAAAAATGTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTT--TAAAT-TTTC
* * * * *
6318 CAGAGTTGGTATCGGTTGGCCTTCCCTAAAAATTGAATTTTTA
1 AAAAGTTGGCATCGGTTGGCCTT--CT-----TT-AAATTTTC
*
6361 AAAAG-TGAGCATCGGTTGGCCTTC-TAAAAGTTTTC
1 AAAAGTTG-GCATCGGTTGGCCTTCTTTAAA-TTTTC
* *
6396 -AAAGTTGGTATCGGTTGGACTTCTTTAAAAATGTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTT--AAAT-TTTC
* * * * ** * *
6433 CAGAGTGGGTATTAGTTGGCCTTCTCTAAAAATTGAGTTTTTA
1 AAAAGTTGGCATCGGTTGGCCTTCT-T--TAA---A--TTTTC
* **
6476 AAAAGTGGGCATCGGTTGGCCTTCTAAAAAGTTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTTAAA-TTTTC
* *
6512 -AAAGTTGGTATCGGTTGGCCTACTTTAAAATCGAATTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTT---A---AATTTTC
* * * *
6552 CAAAGTTCGTATCGGTTAGCCTTCTTTAAAAATGTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTT--AAAT-TTTC
* * * * * *
6590 CAGAGTTGGTATCGATTGGCCTTCTCTAAAAATTGAGTTTTT
1 AAAAGTTGGCATCGGTTGGCCTTCT-T--TAA---A-TTTTC
* * **
6632 AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTTAAA-TTTTC
* * *
6668 AAAAGTTGGCCTTGGTTGGCCTTC-TTAAAGTTTC
1 AAAAGTTGGCATCGGTTGGCCTTCTTTAAATTTTC
6702 GAGTTATGAA
Statistics
Matches: 410, Mismatches: 70, Indels: 111
0.69 0.12 0.19
Matches are distributed among these distances:
33 2 0.00
34 24 0.06
35 102 0.25
36 42 0.10
37 21 0.05
38 67 0.16
39 9 0.02
40 13 0.03
41 28 0.07
42 30 0.07
43 67 0.16
44 4 0.01
45 1 0.00
ACGTcount: A:0.26, C:0.16, G:0.22, T:0.36
Consensus pattern (35 bp):
AAAAGTTGGCATCGGTTGGCCTTCTTTAAATTTTC
Found at i:6249 original size:78 final size:76
Alignment explanation
Indices: 6133--6768 Score: 450
Period size: 78 Copynumber: 8.3 Consensus size: 76
6123 AAGTTTTATA
* *
6133 AAAGTCGGCATCGGTTGGCCTTCTTT-AAATC-----TTCAAAAGTTGGCATCGGTTGGCCTTCT
1 AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCTTCT
**
6192 AATTAGTTTTC
66 AAAAAGTTTTC
*
6203 AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTTAAAAAGTGGGCATCGGTTGGCCTT
1 AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAG-TTTTT-AAAAGTTGGCATCGGTTGGCCTT
6268 CTAAAAAGTTTTC
64 CTAAAAAGTTTTC
* * ** * *
6281 AAAGTTGGTATCGGTTGGCCTTC-TTAAAA---AATGTTTCCAGAGTTGGTATCGGTTGGCCTTC
1 AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGT-TTTTAAAAGTTGGCATCGGTTGGCCTT-
*
6342 CCTAAAAATTGAATTTTTAA
64 -CTAAAAA--G---TTTT-C
* * *
6362 AAAG-TGAGCATCGGTTGGCCTTC--T-AAA---AG-TTTTCAAAGTTGGTATCGGTTGGACTTC
1 AAAGTTG-GCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCTTC
*
6419 TTTAAAAATGTTTCC
65 --TAAAAA-GTTTTC
* * * ** * * *
6434 AGAGTGGGTATTAGTTGGCCTTCTCTAAAAATTGAGTTTTTAAAAAGTGGGCATCGGTTGGCCTT
1 AAAGTTGGCATCGGTTGGCCTTCT-TTAAAATCGAGTTTTT-AAAAGTTGGCATCGGTTGGCCTT
6499 CTAAAAAGTTTTC
64 CTAAAAAGTTTTC
* * * ** * * *
6512 AAAGTTGGTATCGGTTGGCCTACTTTAAAATCGAATTTTCCAAAGTTCGTATCGGTTAGCCTTCT
1 AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCTTC-
*
6577 TTAAAAATGTTTCC
65 -TAAAAA-GTTTTC
* * * * * * *
6591 AGAGTTGGTATCGATTGGCCTTCTCTAAAAATTGAGTTTTTAAAAGTAGGCATCGGTTGGCCTCC
1 AAAGTTGGCATCGGTTGGCCTTCT-TTAAAATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCTTC
6656 TAAAAAGTTTTC
65 TAAAAAGTTTTC
* * * * * *
6668 AAAAGTTGGCCTTGGTTGGCCTTC-TTAAAGTTTCGAG-TTATGAAAGTTGGCATCGGTTGGTCT
1 -AAAGTTGGCATCGGTTGGCCTTCTTTAAA--ATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCT
* *
6731 T-TGAAATGTTTTC
63 TCTAAAAAGTTTTC
* **
6744 ATAGTTGGCATTAGTTGGCCTTCTT
1 AAAGTTGGCATCGGTTGGCCTTCTT
6769 AAAGTTGTTT
Statistics
Matches: 450, Mismatches: 78, Indels: 70
0.75 0.13 0.12
Matches are distributed among these distances:
70 25 0.06
71 5 0.01
72 16 0.04
73 24 0.05
74 4 0.01
75 28 0.06
76 39 0.09
77 78 0.17
78 113 0.25
79 38 0.08
80 41 0.09
81 39 0.09
ACGTcount: A:0.25, C:0.16, G:0.22, T:0.37
Consensus pattern (76 bp):
AAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTAAAAGTTGGCATCGGTTGGCCTTCT
AAAAAGTTTTC
Found at i:6373 original size:116 final size:115
Alignment explanation
Indices: 6048--6584 Score: 647
Period size: 115 Copynumber: 4.6 Consensus size: 115
6038 TCGTTACGAA
* * * *
6048 TTTTCAAAGATGGTATCGGTTGGCCTTCCT-AAAATGTTTTCAGAGTTGGTATCATGTTGGCCTT
1 TTTTCAAAGTTGGTATCGGTTGGCCTTCTTAAAAATGTTTCCAGAGTTGGTATC-GGTTGGCCTT
* * * **
6112 CTCTAAAAA-TCAAGTTTTATAAAAGTCGGCATCGGTTGGCCTTCTTTAAA-
65 CTCTAAAAATTGAATTTTTA-AAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
* * ** * * *
6162 TCTTCAAAAGTTGGCATCGGTTGGCCTTC-TAATTA-GTTTTCAAAGTTGGCATCGGTTGGCCTT
1 TTTTC-AAAGTTGGTATCGGTTGGCCTTCTTAAAAATGTTTCCAGAGTTGGTATCGGTTGGCCTT
* * *
6225 CT-TTAAAATCGAGTTTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
65 CTCTAAAAATTGA-ATTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
6276 TTTTCAAAGTTGGTATCGGTTGGCCTTCTTAAAAAATGTTTCCAGAGTTGGTATCGGTTGGCCTT
1 TTTTCAAAGTTGGTATCGGTTGGCCTTCTT-AAAAATGTTTCCAGAGTTGGTATCGGTTGGCCTT
* *
6341 CCCTAAAAATTGAATTTTTAAAAAGTGAGCATCGGTTGGCCTTCT-AAAAG
65 CTCTAAAAATTGAATTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
* * **
6391 TTTTCAAAGTTGGTATCGGTTGGACTTCTTTAAAAATGTTTCCAGAGTGGGTATTAGTTGGCCTT
1 TTTTCAAAGTTGGTATCGGTTGGCCTTC-TTAAAAATGTTTCCAGAGTTGGTATCGGTTGGCCTT
*
6456 CTCTAAAAATTGAGTTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
65 CTCTAAAAATTGAATTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
* * * * *
6507 TTTTCAAAGTTGGTATCGGTTGGCCTACTTTAAAATCGAATTTTCCAAAGTTCGTATCGGTTAGC
1 TTTTCAAAGTTGGTATCGGTTGGCCTTCTTAAAAAT-G---TTTCCAGAGTTGGTATCGGTTGGC
*
6572 CTTCTTTAAAAAT
62 CTTCTCTAAAAAT
6585 GTTTCCAGAG
Statistics
Matches: 363, Mismatches: 45, Indels: 25
0.84 0.10 0.06
Matches are distributed among these distances:
112 5 0.01
113 61 0.17
114 31 0.09
115 138 0.38
116 90 0.25
117 8 0.02
119 30 0.08
ACGTcount: A:0.26, C:0.16, G:0.21, T:0.37
Consensus pattern (115 bp):
TTTTCAAAGTTGGTATCGGTTGGCCTTCTTAAAAATGTTTCCAGAGTTGGTATCGGTTGGCCTTC
TCTAAAAATTGAATTTTTAAAAAGTGGGCATCGGTTGGCCTTCTAAAAAG
Found at i:6602 original size:38 final size:38
Alignment explanation
Indices: 6052--6622 Score: 336
Period size: 38 Copynumber: 14.9 Consensus size: 38
6042 TACGAATTTT
* * *
6052 CAAAGATGGTATCGGTTGGCCTTC-CT-AAAATGTTTT
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* * * *
6088 CAGAGTTGGTATCATGTTGGCCTTCTCTAAAAATCAAGTTTTAT
1 CAAAGTTGGTATC-GGTTGGCCTTCTTTAAAAAT---G-TTT-C
* * * *
6132 AAAAGTCGGCATCGGTTGGCCTTCTTT--AAAT-CTTC
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* * ** *
6167 AAAAGTTGGCATCGGTTGGCCTTC--TAATTA-GTTTT
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* * *
6202 CAAAGTTGGCATCGGTTGGCCTTCTTTAAAATCGAGTTTTTTA
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAA---A--TGTTTC
* * * *
6245 AAAAGTGGGCATCGGTTGGCCTTC--TAAAAA-GTTTT
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
*
6280 CAAAGTTGGTATCGGTTGGCCTTCTTAAAAAATGTTTC
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* ** *
6318 CAGAGTTGGTATCGGTTGGCCTTCCCTAAAAATTGAATTTTTA
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAA-TG----TTTC
* * *
6361 AAAAG-TGAGCATCGGTTGGCCTTC--T-AAAA-GTTTT
1 CAAAGTTG-GTATCGGTTGGCCTTCTTTAAAAATGTTTC
*
6395 CAAAGTTGGTATCGGTTGGACTTCTTTAAAAATGTTTC
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* * ** * *
6433 CAGAGTGGGTATTAGTTGGCCTTCTCTAAAAATTGAGTTTTTA
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAA-T--G--TTTC
* * * *
6476 AAAAGTGGGCATCGGTTGGCCTTC--TAAAAA-GTTTT
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
*
6511 CAAAGTTGGTATCGGTTGGCCTACTTT-AAAATCGAATTTTC
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAAT-G---TTTC
* *
6552 CAAAGTTCGTATCGGTTAGCCTTCTTTAAAAATGTTTC
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
* * *
6590 CAGAGTTGGTATCGATTGGCCTTCTCTAAAAAT
1 CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAAT
6623 TGAGTTTTTA
Statistics
Matches: 420, Mismatches: 69, Indels: 90
0.73 0.12 0.16
Matches are distributed among these distances:
33 1 0.00
34 21 0.05
35 98 0.23
36 18 0.04
37 24 0.06
38 99 0.24
39 8 0.02
40 5 0.01
41 45 0.11
42 8 0.02
43 83 0.20
44 10 0.02
ACGTcount: A:0.26, C:0.16, G:0.21, T:0.37
Consensus pattern (38 bp):
CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTC
Found at i:6620 original size:79 final size:79
Alignment explanation
Indices: 6391--6653 Score: 266
Period size: 79 Copynumber: 3.3 Consensus size: 79
6381 CTTCTAAAAG
* * *
6391 TTTTCAAAGTTGGTATCGGTTGGACTTCTTTAAAAATGTTTCCAGAGTGGGTAT-TAGTTGGCCT
1 TTTTCAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGA-TTGGCCT
* *
6455 TCTCTAAAAATTGAGT
65 TCTCT-AAAATCGAGA
* * * * * *
6471 TTTTAAAAAGTGGGCATCGGTTGGCCTTC--TAAAAA-GTTTTCAAAGTTGGTATCGGTTGGCCT
1 TTTT-CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGATTGGCCT
* *
6533 ACTTTAAAATCGA-A
65 TCTCTAAAATCGAGA
* *
6547 TTTTCCAAAGTTCGTATCGGTTAGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGATTGGCCT
1 TTTT-CAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGATTGGCCT
* *
6612 TCTCTAAAAATTGAGT
65 TCTCT-AAAATCGAGA
* * *
6628 TTTTAAAAGTAGGCATCGGTTGGCCT
1 TTTTCAAAGTTGGTATCGGTTGGCCT
6654 CCTAAAAAGT
Statistics
Matches: 145, Mismatches: 31, Indels: 14
0.76 0.16 0.07
Matches are distributed among these distances:
76 23 0.16
77 7 0.05
78 30 0.21
79 33 0.23
80 28 0.19
81 24 0.17
ACGTcount: A:0.26, C:0.15, G:0.22, T:0.38
Consensus pattern (79 bp):
TTTTCAAAGTTGGTATCGGTTGGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGATTGGCCTT
CTCTAAAATCGAGA
Found at i:6725 original size:157 final size:157
Alignment explanation
Indices: 6167--6689 Score: 463
Period size: 157 Copynumber: 3.4 Consensus size: 157
6157 TTAAATCTTC
* * ** *
6167 AAAAGTTGGCATCGGTTGGCCTTCTAATTAGTTTTCAAAGTTGGCATCGGTTGGCCTTCTTTAAA
1 AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAGTTGGCATCGGTTGGCCTACTTTAAA
* * ** * * * * * * *
6232 ATCGAGTTTTTTAAAAAGTGGGCATCGGTTGGCCTTC--TAAAAA-GTTTTCAAAGTTGGTATCG
66 ATCGA--ATTATCCAAAGTTGGTATCGGTTAGACTTCTTTAAAAATGTTTCCAGAGTGGGTAT-G
* *
6294 -GTTGGCCTTCT-TAAAAA---A-TGTTTC
128 AGTTGGCCTTCTCTAAAAATTGAGTTTTTA
* * * * *
6318 CAGAGTTGGTATCGGTTGGCCTTCCCTAAAAATTGAATTTTTAAAAAG-TGAGCATCGGTTGGCC
1 AAAAGTAGGCATCGGTTGGCC-T-CCTAAAAA--G---TTTT-CAAAGTTG-GCATCGGTTGGCC
* * *
6382 T--TCTAAAA--G--TT-TTCAAAGTTGGTATCGGTTGGACTTCTTTAAAAATGTTTCCAGAGTG
57 TACTTTAAAATCGAATTATCCAAAGTTGGTATCGGTTAGACTTCTTTAAAAATGTTTCCAGAGTG
*
6440 GGTATTAGTTGGCCTTCTCTAAAAATTGAGTTTTTA
122 GGTATGAGTTGGCCTTCTCTAAAAATTGAGTTTTTA
* * *
6476 AAAAGTGGGCATCGGTTGGCCTTCTAAAAAGTTTTCAAAGTTGGTATCGGTTGGCCTACTTTAAA
1 AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAGTTGGCATCGGTTGGCCTACTTTAAA
* * * *
6541 ATCGAATTTTCCAAAGTTCGTATCGGTTAGCCTTCTTTAAAAATGTTTCCAGAGTTGGTATCGA-
66 ATCGAATTATCCAAAGTTGGTATCGGTTAGACTTCTTTAAAAATGTTTCCAGAGTGGGTAT-GAG
6605 TTGGCCTTCTCTAAAAATTGAGTTTTT-
130 TTGGCCTTCTCTAAAAATTGAGTTTTTA
* *
6632 AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAAGTTGGCCTTGGTTGGCCT
1 AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTC-AAAGTTGGCATCGGTTGGCCT
6690 TCTTAAAGTT
Statistics
Matches: 306, Mismatches: 38, Indels: 50
0.78 0.10 0.13
Matches are distributed among these distances:
150 38 0.12
151 26 0.08
152 13 0.04
153 30 0.10
154 8 0.03
155 2 0.01
156 43 0.14
157 100 0.33
158 28 0.09
159 18 0.06
ACGTcount: A:0.26, C:0.15, G:0.22, T:0.36
Consensus pattern (157 bp):
AAAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAGTTGGCATCGGTTGGCCTACTTTAAA
ATCGAATTATCCAAAGTTGGTATCGGTTAGACTTCTTTAAAAATGTTTCCAGAGTGGGTATGAGT
TGGCCTTCTCTAAAAATTGAGTTTTTA
Found at i:6766 original size:75 final size:77
Alignment explanation
Indices: 6633--6774 Score: 198
Period size: 75 Copynumber: 1.9 Consensus size: 77
6623 TGAGTTTTTA
* *
6633 AAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAAGTTGGCCTTGGTTGGCCTTCTTAAAG
1 AAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAAGTTGGCATTAGTTGGCCTTCTTAAAG
6698 TTTCGAGTTATG
66 TTTCGAGTTATG
* * * * * *
6710 AAAGTTGGCATCGGTTGGTCT-TTGAAATGTTTTC-ATAGTTGGCATTAGTTGGCCTTCTTAAAG
1 AAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAAGTTGGCATTAGTTGGCCTTCTTAAAG
6773 TT
66 TT
6775 GTTTCCTAAA
Statistics
Matches: 57, Mismatches: 8, Indels: 2
0.85 0.12 0.03
Matches are distributed among these distances:
75 28 0.49
76 10 0.18
77 19 0.33
ACGTcount: A:0.23, C:0.15, G:0.25, T:0.37
Consensus pattern (77 bp):
AAAGTAGGCATCGGTTGGCCTCCTAAAAAGTTTTCAAAAGTTGGCATTAGTTGGCCTTCTTAAAG
TTTCGAGTTATG
Done.