Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015281.1 Corchorus olitorius cultivar O-4 contig15314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5828

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2894--3024
66
2.0
67
80
8
151
35
10
15
38
1.82
2898--3085
90
2.1
88
81
6
218
37
9
15
37
1.80
2896--3072
22
8.0
21
72
7
111
35
9
15
38
1.81
3090--3504
22
18.8
21
69
15
146
39
10
16
33
1.83
3090--4030
44
21.8
42
65
17
228
38
10
16
35
1.82
3740--3803
23
2.8
23
88
2
85
37
1
20
40
1.62
3740--3836
23
4.4
22
80
14
67
37
7
18
37
1.79
3510--4122
22
28.4
22
67
14
129
38
10
15
36
1.81

Tables:   1

The End!