Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015284.1 Corchorus olitorius cultivar O-4 contig15317, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69775

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16669--16706
20
1.9
20
84
10
51
23
23
31
21
1.98
16974--17010
16
2.3
16
90
0
56
0
67
0
32
0.91
29172--29206
18
1.9
18
94
0
61
42
28
20
8
1.81
30609--30644
19
1.9
18
88
5
54
41
2
22
33
1.68
37490--37568
36
2.2
37
86
2
115
58
10
20
11
1.61
38414--39316
59
15.3
59
91
0
1268
26
15
17
40
1.90
46060--46108
22
2.2
22
85
0
62
36
14
34
14
1.86
51055--51100
20
2.3
20
85
7
67
26
32
23
17
1.97
52196--52243
25
1.9
25
91
0
78
35
18
31
14
1.91
63496--63527
2
16.0
2
100
0
64
50
0
0
50
1.00
69416--69521
36
2.9
36
94
2
178
22
9
8
59
1.55

Tables:   1

The End!