Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015285.1 Corchorus olitorius cultivar O-4 contig15318, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55632

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
455--547
32
3.0
32
85
4
129
21
33
23
21
1.97
489--541
16
3.3
16
70
19
56
22
28
24
24
2.00
4092--4300
105
2.0
106
88
3
314
39
15
13
31
1.86
4230--4369
73
1.9
74
89
1
219
41
7
17
33
1.78
4703--4743
20
2.0
20
95
0
73
39
21
9
29
1.86
45132--45180
19
2.6
19
83
0
71
44
28
2
24
1.65
45155--45206
27
1.9
27
88
0
77
44
26
1
26
1.65
45265--45297
16
2.1
16
94
0
57
48
21
6
24
1.72

Tables:   1

The End!