Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015289.1 Corchorus olitorius cultivar O-4 contig15322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21642

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
404--568
83
2.0
83
98
0
321
47
0
14
37
1.44
5533--5559
14
1.9
14
100
0
54
55
0
7
37
1.28
5865--5915
25
2.0
26
88
7
77
43
3
9
43
1.56
6746--6773
3
9.3
3
100
0
56
32
0
0
67
0.91
7684--7883
22
9.1
22
75
6
156
40
8
16
35
1.78
7676--7883
43
4.8
44
78
6
156
41
7
15
34
1.76
7676--7743
21
3.2
20
76
10
55
52
5
17
23
1.66
7696--7752
21
2.7
21
77
0
69
49
8
15
26
1.74
8651--8773
52
2.3
54
90
2
187
18
11
24
45
1.82
8651--8773
26
4.7
26
89
2
165
18
11
24
45
1.82
8702--8781
28
2.9
28
85
3
83
17
13
25
43
1.86
8651--8788
26
5.2
26
85
5
141
18
13
24
43
1.86
19907--19937
2
16.0
2
93
6
55
51
48
0
0
1.00

Tables:   1

The End!