Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015291.1 Corchorus olitorius cultivar O-4 contig15324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38719

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--68
25
2.1
26
89
3
83
33
9
14
42
1.78
452--520
35
2.0
35
97
0
129
18
24
21
34
1.96
679--728
25
2.0
25
100
0
100
20
48
4
28
1.67
2411--2705
147
2.0
147
95
0
536
28
13
24
33
1.94
10069--10181
3
37.7
3
100
0
226
33
0
0
66
0.92
16300--16325
12
2.2
12
100
0
52
57
0
34
7
1.27
17060--17089
15
2.1
14
93
6
51
33
0
0
66
0.92
18048--18077
15
2.1
14
93
6
51
66
0
0
33
0.92
21777--21801
1
25.0
1
100
0
50
0
0
0
100
0.00
25273--25300
2
14.0
2
100
0
56
50
0
0
50
1.00
25892--25942
14
3.7
14
80
15
70
1
1
13
82
0.85
25929--25971
22
2.0
22
85
0
59
0
13
18
67
1.23
26489--26523
11
3.2
11
91
0
61
80
17
2
0
0.84
28449--28496
25
1.9
25
87
8
71
35
0
2
62
1.07
32990--33050
30
2.0
30
96
0
113
16
3
18
62
1.46

Tables:   1

The End!