Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015292.1 Corchorus olitorius cultivar O-4 contig15325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8780

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
235--274
20
2.0
20
95
0
71
42
25
10
22
1.84
421--988
203
2.8
201
90
1
886
33
16
15
34
1.90
1723--1758
17
2.1
17
100
0
72
41
16
13
27
1.87
4038--4128
41
2.2
41
90
7
141
38
19
19
21
1.94
4213--4301
41
2.2
41
91
0
142
39
16
20
23
1.92
4004--4443
173
2.5
173
93
1
733
37
16
18
28
1.92
6266--6301
2
18.5
2
94
5
65
50
0
0
50
1.00
8368--8400
2
16.5
2
100
0
66
51
0
0
48
1.00
8610--8642
13
2.6
13
90
4
50
0
15
0
84
0.61

Tables:   1

The End!