Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015294.1 Corchorus olitorius cultivar O-4 contig15327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31204

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--595
19
1.9
18
88
5
54
41
8
22
27
1.82
14335--14376
15
2.7
15
92
3
66
64
14
9
11
1.50
15306--15335
12
2.4
13
88
11
53
66
13
6
13
1.43
24986--25017
16
1.9
17
93
6
57
81
0
9
9
0.88
25228--25257
12
2.4
13
88
11
53
66
13
6
13
1.43
29741--29789
2
25.0
2
89
4
73
44
2
0
53
1.12
31022--31091
36
1.9
36
91
0
113
60
8
10
21
1.55

Tables:   1

The End!