Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015296.1 Corchorus olitorius cultivar O-4 contig15329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9014

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--135
16
1.9
16
93
0
53
64
12
3
19
1.41
2167--2192
3
8.7
3
100
0
52
69
0
30
0
0.89
2229--2322
35
2.7
35
89
0
143
17
43
36
3
1.65
3333--3407
28
2.7
28
77
6
73
25
21
14
38
1.91
8389--8435
3
15.7
3
100
0
94
68
0
31
0
0.90
8590--8639
20
2.5
21
81
15
61
80
0
10
10
0.92
8598--8639
19
2.2
19
87
8
59
80
0
7
11
0.88
8607--8639
9
3.3
10
87
12
50
81
0
9
9
0.87

Tables:   1

The End!