Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000153.1 Corchorus olitorius cultivar O-4 contig00153, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14926

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148--557
202
2.0
202
98
0
793
28
16
16
38
1.91
3370--3394
13
1.9
13
100
0
50
64
8
8
20
1.46
12294--12352
13
4.5
13
84
0
82
28
0
45
25
1.54
12294--12352
26
2.3
26
100
0
118
28
0
45
25
1.54
13117--13280
60
2.7
60
85
0
220
33
16
18
31
1.94
13323--13457
58
2.3
59
85
6
184
26
17
17
39
1.91
13324--13480
58
2.7
58
84
2
170
28
15
17
38
1.90

Tables:   1

The End!