Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015302.1 Corchorus olitorius cultivar O-4 contig15335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2404

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1234--1310
29
2.7
29
85
2
111
42
22
14
20
1.88
1335--1364
14
2.1
14
100
0
60
53
6
6
33
1.53
1585--1821
35
6.8
35
92
0
386
29
22
19
28
1.98
1837--1966
50
2.6
50
90
1
188
29
10
28
31
1.91

Tables:   1

The End!