Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015304.1 Corchorus olitorius cultivar O-4 contig15337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3515

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
386--462
29
2.7
29
85
2
111
42
22
14
20
1.88
487--516
14
2.1
14
100
0
60
53
6
6
33
1.53
1381--1498
33
3.6
33
78
4
96
44
19
7
27
1.78
2108--2139
15
2.1
15
94
0
55
15
9
28
46
1.77
2933--2967
12
3.0
12
91
4
54
17
0
0
82
0.66
2934--2968
11
3.1
11
91
4
52
14
0
0
85
0.59

Tables:   1

The End!