Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015311.1 Corchorus olitorius cultivar O-4 contig15344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15491

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1914--1944
15
2.1
15
100
0
62
67
12
0
19
1.22
8496--8537
18
2.3
19
80
12
52
78
4
11
4
1.06
8520--8571
15
3.6
14
80
19
54
76
9
11
1
1.09
8532--8572
14
2.9
15
80
20
52
75
9
14
0
1.04
10746--10788
16
2.8
16
78
3
52
44
23
18
13
1.86
11108--11249
49
3.0
48
85
9
191
52
5
15
26
1.65

Tables:   1

The End!