Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015315.1 Corchorus olitorius cultivar O-4 contig15348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20198

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1231--1501
8
34.9
8
65
23
84
26
11
1
61
1.36
1216--1332
44
2.7
44
89
1
173
27
8
0
64
1.23
1268--1392
59
2.1
60
87
1
180
26
9
0
64
1.24
1215--1354
4
35.8
4
68
17
62
27
8
0
64
1.22
1497--1539
17
2.5
17
76
0
50
18
2
2
76
1.00
2580--2637
28
2.1
28
80
6
64
51
6
10
31
1.62
4649--4690
22
1.9
22
85
0
57
11
28
38
21
1.89
14227--14252
11
2.4
11
100
0
52
7
15
7
69
1.35

Tables:   1

The End!