Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015328.1 Corchorus olitorius cultivar O-4 contig15361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41701

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3742--3778
19
1.9
19
94
0
65
32
29
13
24
1.93
6018--6069
26
2.1
26
92
7
90
48
28
15
7
1.73
10718--10784
29
2.3
29
87
5
91
41
28
11
17
1.85
12502--12531
2
15.0
2
92
0
51
46
0
3
50
1.18
12965--13003
16
2.4
16
95
0
69
46
17
0
35
1.49
17524--17648
60
2.1
60
90
3
198
37
15
16
30
1.90
20236--20332
51
1.9
51
95
0
176
35
26
9
28
1.87
25994--26055
28
2.2
28
85
0
88
40
20
9
29
1.84
27000--27122
62
2.0
62
98
0
237
26
24
15
33
1.95
27177--27230
18
3.0
18
100
0
108
38
11
11
38
1.76
41182--41227
4
11.5
4
100
0
92
76
0
0
23
0.79

Tables:   1

The End!