Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015329.1 Corchorus olitorius cultivar O-4 contig15362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72510

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1496--1520
3
8.3
3
100
0
50
32
36
32
0
1.58
3571--3601
1
31.0
1
100
0
62
100
0
0
0
0.00
5808--5836
2
14.5
2
100
0
58
51
0
0
48
1.00
6931--6964
2
17.0
2
100
0
68
50
0
0
50
1.00
10597--10715
62
1.9
62
84
6
161
21
21
23
33
1.97
10588--10724
31
4.4
31
80
10
145
21
21
23
32
1.98
18892--18944
23
2.3
23
90
3
79
39
15
0
45
1.46
18978--19061
30
2.8
30
87
1
123
47
8
8
35
1.64
23857--23883
12
2.2
12
100
0
54
33
7
18
40
1.78
34100--34126
6
4.5
6
100
0
54
62
0
18
18
1.32
41092--41154
31
2.0
31
81
0
72
36
14
15
33
1.88
63135--63166
8
3.9
8
95
4
55
90
0
0
9
0.45
63134--63168
9
4.0
9
92
7
63
88
0
0
11
0.51
63135--63168
17
2.0
17
100
0
68
88
0
0
11
0.52

Tables:   1

The End!