Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015334.1 Corchorus olitorius cultivar O-4 contig15367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80937

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7507--7540
17
2.0
17
88
11
52
20
2
0
76
0.92
13121--13153
2
17.0
2
93
6
59
51
0
0
48
1.00
20021--20049
4
7.2
4
100
0
58
24
0
24
51
1.48
20725--20800
31
2.5
31
82
0
98
32
25
26
15
1.95
25003--25028
13
2.0
13
100
0
52
84
0
15
0
0.62
31266--31422
77
2.0
77
96
0
287
31
18
23
26
1.97
31869--32030
55
2.9
55
90
0
252
32
12
14
40
1.84
49256--49299
3
14.7
3
82
0
52
70
2
27
0
0.99
49256--49309
12
4.5
12
80
0
63
68
5
25
0
1.11
50017--50062
22
2.1
22
100
0
92
26
8
8
56
1.58
53443--53602
80
2.0
80
96
0
293
23
33
11
31
1.91
69917--69974
27
2.1
27
93
6
100
34
25
24
15
1.95
77138--77187
23
2.2
23
82
7
57
48
10
0
42
1.37
79071--79148
29
2.6
32
88
9
112
42
6
12
38
1.69

Tables:   1

The End!