Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015336.1 Corchorus olitorius cultivar O-4 contig15369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61243

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2179
321
6.7
320
82
7
2242
33
14
16
34
1.90
1532--3688
687
3.1
682
84
5
2661
32
14
16
36
1.90
22354--22409
26
2.2
26
100
0
112
42
35
8
12
1.74
40123--40394
134
2.0
134
100
0
544
34
16
19
29
1.94
51760--51858
31
3.3
31
77
8
105
34
19
9
37
1.83
53606--53683
30
2.5
31
80
12
115
38
17
8
34
1.82
53610--53683
31
2.4
30
81
2
103
37
17
9
35
1.82
54000--54025
7
3.7
7
100
0
52
23
15
0
61
1.33
54037--54433
197
2.0
197
98
0
758
34
19
21
24
1.96
55335--55373
13
3.0
13
88
7
53
56
0
15
28
1.40
56459--56527
31
2.2
31
92
0
120
33
14
14
37
1.87
60839--60888
22
2.3
21
86
3
64
76
2
22
0
0.89

Tables:   1

The End!