Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015337.1 Corchorus olitorius cultivar O-4 contig15370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48012

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1872--1906
7
5.1
7
86
6
54
0
17
0
82
0.66
8039--8067
7
4.1
7
100
0
58
55
0
17
27
1.42
16352--16383
14
2.4
13
94
5
55
87
0
12
0
0.54
21153--21349
42
4.7
42
81
6
247
11
26
10
51
1.70
21163--21349
84
2.2
84
90
1
286
12
27
9
50
1.70
21360--21549
54
3.3
57
83
8
253
13
27
13
45
1.81
21929--21966
18
2.0
20
90
10
62
0
7
26
65
1.19
32280--32322
2
21.5
2
100
0
86
51
0
48
0
1.00
39016--39181
85
2.0
85
97
0
314
47
22
8
21
1.77
41470--43053
328
4.8
327
77
8
1229
36
15
14
33
1.87
43394--43423
15
1.9
16
93
6
53
53
3
0
43
1.17
43717--43750
8
4.2
8
92
0
59
52
0
23
23
1.47
43720--43780
5
13.4
5
77
19
62
60
0
18
21
1.36

Tables:   1

The End!