Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015342.1 Corchorus olitorius cultivar O-4 contig15375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23600

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1218
17
2.3
18
87
8
57
5
0
17
77
0.94
1461--1532
27
2.6
28
86
2
92
22
6
31
38
1.81
11519--11574
26
2.2
26
93
0
94
25
17
23
33
1.96
11875--11899
12
2.1
12
100
0
50
52
16
16
16
1.76
14611--14656
23
2.0
23
83
8
58
45
6
17
30
1.73
15050--15115
30
2.2
30
97
0
123
25
24
4
45
1.72
17008--17064
27
2.1
27
83
6
71
40
26
8
24
1.84

Tables:   1

The End!