Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015343.1 Corchorus olitorius cultivar O-4 contig15376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67103

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3051--3150
45
2.2
45
89
0
146
25
34
18
23
1.96
15123--15211
41
2.2
41
93
0
151
5
24
17
51
1.67
21778--21885
42
2.5
42
89
1
171
32
20
31
15
1.94
32158--32193
17
2.1
18
89
5
56
0
11
2
86
0.68
32165--32200
17
2.1
17
89
0
54
2
8
5
83
0.89
33293--33336
11
4.1
11
85
5
63
68
18
13
0
1.22
52374--52403
7
4.3
7
95
0
51
86
3
10
0
0.67
56327--56361
2
17.5
2
100
0
70
0
48
0
51
1.00
57768--57846
38
2.1
38
100
0
158
44
5
11
39
1.62
62037--62079
22
2.0
22
86
9
61
4
32
0
62
1.15
66257--66357
44
2.3
45
94
3
186
25
23
20
29
1.99
67073--67103
2
15.5
2
100
0
62
0
51
0
48
1.00

Tables:   1

The End!