Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015344.1 Corchorus olitorius cultivar O-4 contig15377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3799

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--160
34
2.6
34
98
0
171
3
30
20
46
1.66
132--387
62
4.1
62
97
0
476
3
38
23
35
1.70
2396--3616
619
2.0
619
81
7
1459
35
16
13
34
1.89
2996--3799
325
2.5
317
76
11
822
36
15
12
35
1.86

Tables:   1

The End!