Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015352.1 Corchorus olitorius cultivar O-4 contig15385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37532

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
992--1081
45
2.1
43
87
6
128
40
21
5
33
1.76
2228--2254
2
13.5
2
100
0
54
51
0
0
48
1.00
4787--4833
16
2.9
15
84
15
58
2
14
4
78
0.99
6163--6200
2
19.0
2
100
0
76
50
0
0
50
1.00
20509--20592
36
2.3
36
89
0
123
28
42
10
17
1.83
20616--20755
66
2.1
66
93
2
237
25
52
5
17
1.64
25698--31034
332
16.3
330
76
8
4163
36
15
14
34
1.88
25701--31034
986
5.4
980
76
9
4126
36
15
14
34
1.88
31357--31408
21
2.5
21
76
14
54
57
5
1
34
1.33
31395--31424
15
1.9
16
93
6
53
53
3
0
43
1.17
31386--31454
35
1.9
37
82
11
90
55
2
2
39
1.30
31642--31672
4
7.8
4
100
0
62
25
0
22
51
1.48
31577--31752
77
2.3
75
87
9
282
35
5
15
43
1.69
31719--31745
4
6.8
4
100
0
54
25
0
22
51
1.48
31759--31783
10
2.5
10
100
0
50
60
8
0
32
1.26
31577--31792
81
2.7
77
86
8
256
38
5
13
42
1.68

Tables:   1

The End!