Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015356.1 Corchorus olitorius cultivar O-4 contig15389, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17771

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4205--4231
7
3.9
7
100
0
54
74
11
0
14
1.08
5023--5063
18
2.3
18
91
0
64
56
12
9
21
1.65
9898--9948
21
2.5
20
78
6
66
23
41
29
5
1.78
13774--13832
31
1.9
31
100
0
118
13
15
30
40
1.86
14598--14625
12
2.3
12
100
0
56
32
17
0
50
1.47
16246--16336
18
4.9
19
80
11
102
17
5
18
58
1.58
16949--16983
13
2.7
13
100
0
70
28
22
8
40
1.84

Tables:   1

The End!